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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108151124_108151419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108151124 - 108151419

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGAGTG

5'SS Class:

major

3'SS Sequence:

TGTGTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

CTCTTCTCAAGT

Flanking Amino Acid:

LKSTVEDFGNLSKTSGPSLV

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

71.9

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

81.2

0.7

0.9

75.8

38.1

Minor 5ss

36.5

-1.5

3.6

44.9

Minor BPS

53.6

0.19

1.9

71.07

46.1

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119