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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108159315_108161101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108159315 - 108161101

Intron Length:

1787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAAACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTGCTTTCAAAC

Flanking Amino Acid:

SNFDFSKLLKGIVTEQGLRE

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

71.5

0.48

0.9

67.7

37.5

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

49.4

-0

1.6

60.84

38.4

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119