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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108169594_108170981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108169594 - 108170981

Intron Length:

1388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCAC

5'SS Class:

major

3'SS Sequence:

AATGTCGTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

CTTCACTTAACG

Flanking Amino Acid:

AILVQVLELKDFIPDILRSG

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.9

38.5

Major BPS

77.7

0.69

83.3

27.7

Major PPT

62.8

0.29

42.1

Minor 5ss

40.7

-1

2.8

52.9

44.2

Minor BPS

66.6

0.38

1.6

70.09

42.7

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119