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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108185292_108198226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108185292 - 108198226

Intron Length:

12935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

GAATATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CTAGTTGTAACA

Flanking Amino Acid:

AGVAALGDFAGYLTKLLQNH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

68.2

0.41

58.8

46.4

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

47.1

-0.2

2.1

58.59

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013307

108184803 - 108218772

33970