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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108217138_108218226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108217138 - 108218226

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GGATTTCTAATT

Flanking Amino Acid:

NSLATFAYIRDHPERAALLF

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.1

0.79

0.8

82.5

32.7

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

51.6

0.13

1.6

66.64

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013307

108184803 - 108218772

33970