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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108227158_108228671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108227158 - 108228671

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CCATTGTGAACA

Flanking Amino Acid:

KTTIIVKIQKKGQGAPGREP

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

84.9

0.78

0.8

81.6

30.4

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

46.5

-0.2

2.1

56.11

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013089

108226851 - 108234543

7693

ENSAPLT00000043519

108226851 - 108235160

8310