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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108263563_108264943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

108263563 - 108264943

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTTTTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.6

41.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

88.6

0.87

0.7

83.7

31.3

Minor 5ss

38.9

-1.3

2.9

45.6

43.8

Minor BPS

82.1

1.09

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034777

108237018 - 108267066

30049

ENSAPLT00000032723

108237018 - 108267066

30049

ENSAPLT00000012358

108237018 - 108267066

30049