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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108315282_108317411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108315282 - 108317411

Intron Length:

2130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

GCSDVEKRNAREQIKQIIKL

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

30.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

47.4

-0.3

2.7

66.9

44.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778