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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108317567_108317881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108317567 - 108317881

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

CTCTTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GTTTTTTTAACT

Flanking Amino Acid:

GDDSIKKAQSVIACFPKQWF

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

76.1

34.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

79.9

0.67

0.8

80.2

31.9

Minor 5ss

33.9

-1.8

2.9

43.1

43.9

Minor BPS

1.11

92.13

30.1

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778