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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108318029_108319617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108318029 - 108319617

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTGTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTTTAAATAATT

Flanking Amino Acid:

FQRQFWSSVKLLGNFLQWYG

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

79.2

0.66

69.7

45.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

49.6

0.05

75.27

41.2

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778