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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108319685_108319949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108319685 - 108319949

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

AATCTCTTACTT

Flanking Amino Acid:

DDVFMPLYPKNILENKNSGP

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

85.4

0.8

36.9

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

58.3

0.34

1.6

72.6

38.4

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778