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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108320901_108321079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108320901 - 108321079

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTCT

5'SS Class:

major

3'SS Sequence:

TCATCTCCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AATTCTTTCATC

Flanking Amino Acid:

VERVVLPKLTVISENIWDPF

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

68.1

37.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.3

0.66

0.8

31.8

Minor 5ss

44.8

-0.6

3.2

65.3

46.1

Minor BPS

60.8

0.32

1.7

69.54

36.2

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012163

108314166 - 108340943

26778

ENSAPLT00000043570

108314166 - 108340943

26778