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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108323447_108325277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108323447 - 108325277

Intron Length:

1831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

ACTGCCATATTT

Flanking Amino Acid:

TDITNFNMERDRILKESSKV

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

78.1

31.1

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

70.5

0.46

0.9

Minor 5ss

29.1

-2.4

2.6

31.9

42.1

Minor BPS

48.1

-0

66.84

44.3

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778