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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108328374_108332891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108328374 - 108332891

Intron Length:

4518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

TGTATTTTTACA

Flanking Amino Acid:

QDLLECFSEKVPLINELESA

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

0.4

1.1

57.8

38.6

Major PPT

85.8

0.81

0.8

37.5

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

56.3

0.19

1.6

68.13

37.8

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012163

108314166 - 108340943

26778

ENSAPLT00000043570

108314166 - 108340943

26778