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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108334268_108335048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108334268 - 108335048

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TTTCTTTAACAC

Flanking Amino Acid:

QIRKGINIPQVQPSQPAEVN

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.9

90.9

28.7

Major BPS

74.7

0.61

65.9

40.9

Major PPT

77.3

0.61

0.7

69.6

31.2

Minor 5ss

37.4

-1.4

3.9

59.2

45.4

Minor BPS

45.3

-0.3

1.9

59.98

39.5

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778