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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108335972_108337654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108335972 - 108337654

Intron Length:

1683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTAT

5'SS Class:

major

3'SS Sequence:

CGTCTATCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTTGTTTTAACG

Flanking Amino Acid:

ALSSLNVLRPGEIPDAAFIH

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

76.1

35.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

71.6

0.49

0.9

62.7

38.7

Minor 5ss

36.8

-1.5

3.1

49.5

46.8

Minor BPS

65.6

0.35

1.5

67.13

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778

ENSAPLT00000012163

108314166 - 108340943

26778