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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108337832_108340456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108337832 - 108340456

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

GTTGTCTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GTTGTCTTAACA

Flanking Amino Acid:

SLLSFQDEEEVEPPLEKTGQ

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.8

44.4

Major BPS

73.5

0.59

81.3

29.9

Major PPT

74.9

0.56

69.8

40.4

Minor 5ss

25.2

-2.8

3.1

24.6

37.1

Minor BPS

75.1

0.79

1.3

79.59

36.6

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043570

108314166 - 108340943

26778