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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108339602_108340456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108339602 - 108340456

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

TTCTCTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TCTCTTTTAAAG

Flanking Amino Acid:

SLLSFQDEEEETEEVFKVKK

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.8

44.4

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

0.68

81.7

27.6

Minor 5ss

25.2

-2.8

3.1

24.6

37.1

Minor BPS

58.8

0.14

1.5

61.29

40.8

Associated Gene:

Gene:

PAXBP1

Ensembl Gene ID:

ENSAPLG00000011625

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012163

108314166 - 108340943

26778