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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108373799_108375857_F

Intron Information:

Intron Rank:

138976

Intron Class:

major

Intron Phase:

Intron Coordinates:

108373799 - 108375857

Intron Length:

2059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

AATTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCCTTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

47.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.2

0.68

0.9

73.7

40.8

Minor 5ss

33.1

-1.9

3.6

43.3

45.3

Minor BPS

62.8

0.38

1.2

65.17

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032108

108373167 - 108377968

4802