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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108464706_108474248_F

Intron Information:

Intron Rank:

136845

Intron Class:

major

Intron Phase:

Intron Coordinates:

108464706 - 108474248

Intron Length:

9543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TCATTATTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

0.4

1.1

63.1

42.2

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

49.1

0.01

1.9

68.18

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048012

108464675 - 108474729

10055