Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108472964_108474248_F

Intron Information:

Intron Rank:

136842

Intron Class:

major

Intron Phase:

Intron Coordinates:

108472964 - 108474248

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTACT

5'SS Class:

major

3'SS Sequence:

TTTGTGCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TCATTATTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.2

75.5

40.4

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

0.4

1.1

63.1

42.2

Minor 5ss

42.8

-0.8

2.9

61.5

42.8

Minor BPS

49.1

0.01

1.9

68.18

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032340

108472094 - 108475133

3040