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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108474337_108474959_F

Intron Information:

Intron Rank:

136843

Intron Class:

major

Intron Phase:

Intron Coordinates:

108474337 - 108474959

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TTGTCTCTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

33.5

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

81.5

0.71

0.8

76.3

32.3

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

53.2

0.09

2.1

71.56

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032340

108472094 - 108475133

3040