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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108492982_108497725_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108492982 - 108497725

Intron Length:

4744

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTCCCTTC

5'SS Class:

weak_major

3'SS Sequence:

CAAGCACCCTTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

GTTCCTATAAGC

Flanking Amino Acid:

LNVLAPSKSCSAEKQGKPKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.4

53.7

47.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

53.4

0.08

0.9

48.3

35.1

Minor 5ss

38.9

-1.2

4.1

59.6

Minor BPS

-0

1.9

65.6

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017996

108488676 - 108497766

9091