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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108503958_108506563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108503958 - 108506563

Intron Length:

2606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

AATGTATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATG

Flanking Amino Acid:

MLSHPSQVWKQNVYFTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.9

25.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

66.8

43.2

Minor 5ss

-1.5

2.6

46.5

41.8

Minor BPS

71.2

0.53

1.3

70.08

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011832

108503937 - 108517337

13401