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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108504931_108506563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

108504931 - 108506563

Intron Length:

1633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

AATGTATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

66.8

43.2

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

71.2

0.53

1.3

70.08

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045039

108504035 - 108517337

13303