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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108514648_108516379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108514648 - 108516379

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

LQKKSLPRTLVFIGGTIRYS

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.6

0.82

0.7

85.5

29.2

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045039

108504035 - 108517337

13303

ENSAPLT00000011832

108503937 - 108517337

13401