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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108519225_108520032_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
108519225 - 108520032

Intron Length:
808

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGTGTTGC

5'SS Class:
strong_major

3'SS Sequence:
ATTGCCCTAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAT

U12 Branch Point Sequence:
ATTGCCCTAACA

Flanking Amino Acid:
CSAGACLPWSVSGTVPKPQN

Intron Amino Acid Position:
13

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.6
0.77
0.9
71
35.7

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
69.5
0.44
1
63.1
37.7

Minor 5ss
41.2
-1
2.7
52.5
44.7

Minor BPS
66.7
0.52
1.8
78.72
37.5

Associated Gene:

Gene:
IL10RB

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108519186 - 108528318
9133