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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108521582_108523440_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
108521582 - 108523440

Intron Length:
1859

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGCCTT

5'SS Class:
major

3'SS Sequence:
TTGTCCTATATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TTGTCCTATATA

Flanking Amino Acid:
AVIRFRPMDDTIIGPPDVKV

Intron Amino Acid Position:
111

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71
0.49
1.1
66.8
44.5

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
74.5
0.55
0.9
69.9
35.7

Minor 5ss
46
-0.4
3.2
71.2
39.5

Minor BPS
55.9
0.18
2
70.72
41.9

Associated Gene:

Gene:
IL10RB

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

108518850 - 108528318
9469

108519186 - 108528318
9133