Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108525090_108525678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108525090 - 108525678

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATAATC

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTAATATTT

Flanking Amino Acid:

QELCEQTTHNGVTPVWIIVT

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

72.1

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

38.6

-1.3

3.1

53.9

Minor BPS

43.5

-0.4

64.22

39.9

Associated Gene:

Gene:

IL10RB

Ensembl Gene ID:

ENSAPLG00000011342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011812

108519186 - 108528318

9133

ENSAPLT00000027030

108518850 - 108528318

9469