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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108552620_108553439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108552620 - 108553439

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTTAA

5'SS Class:

major

3'SS Sequence:

ATATCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTATAATATCT

Flanking Amino Acid:

QHVNYTVQYLLGFFKTLPDD

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

69.6

32.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

80.3

0.68

0.9

74.1

35.7

Minor 5ss

-1.5

2.9

49.9

46.4

Minor BPS

45.3

-0.2

69.3

Associated Gene:

Gene:

IFNAR1

Ensembl Gene ID:

ENSAPLG00000011322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043645

108539956 - 108560903

20948

ENSAPLT00000026466

108538245 - 108560903

22659

ENSAPLT00000011786

108539956 - 108560827

20872