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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108558190_108560602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108558190 - 108560602

Intron Length:

2413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TAGGCATGAATA

Flanking Amino Acid:

PSCTPPLNIEGFGEQLFGSP

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

91.6

0.94

0.6

87.6

22.6

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

48.3

-0.1

1.8

58.66

Associated Gene:

Gene:

IFNAR1

Ensembl Gene ID:

ENSAPLG00000011322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026466

108538245 - 108560903

22659

ENSAPLT00000011786

108539956 - 108560827

20872

ENSAPLT00000043645

108539956 - 108560903

20948