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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108585348_108587514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108585348 - 108587514

Intron Length:

2167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

PLKIPSHIEEYLRDPSMPHL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

81.7

32.2

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

35.2

-1.7

3.5

49.1

47.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011703

108576847 - 108587688

10842