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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108594307_108595452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108594307 - 108595452

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

AGAGGTTTTACT

Flanking Amino Acid:

SYSDGCLGRTGARVWLFIGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

82.6

0.73

0.8

77.4

31.4

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

44.5

-0.3

2.1

59.31

44.2

Associated Gene:

Gene:

TMEM50B

Ensembl Gene ID:

ENSAPLG00000011217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032527

108580197 - 108600989

20793

ENSAPLT00000011669

108591322 - 108597425

6104