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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108595521_108596498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108595521 - 108596498

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTTCTAGTAATC

Flanking Amino Acid:

CGVFSTLAFFMINAVSNAQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

76.2

0.59

0.9

69.4

41.7

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

48.5

-0.1

2.2

68.42

37.2

Associated Gene:

Gene:

TMEM50B

Ensembl Gene ID:

ENSAPLG00000011217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032527

108580197 - 108600989

20793

ENSAPLT00000011669

108591322 - 108597425

6104