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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108614861_108615396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108614861 - 108615396

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGAGAAA

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGACTGACAACT

Flanking Amino Acid:

ACRAVQEIMQDRMFGEVVVI

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

64.3

37.2

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

84.3

0.77

0.9

80.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

40.7

-0.6

2.3

60.41

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011000

108611251 - 108631912

20662