Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108616415_108617178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108616415 - 108617178

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCCG

5'SS Class:

major

3'SS Sequence:

TGTTGATCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTGTCTCAAACA

Flanking Amino Acid:

GMGAYCPVPQVPEVLLEKIN

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

52.9

43.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.3

0.46

67.9

42.6

Minor 5ss

36.5

-1.5

3.3

47.9

47.8

Minor BPS

48.9

-0

63.23

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011000

108611251 - 108631912

20662