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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108625580_108626895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108625580 - 108626895

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATC

5'SS Class:

major

3'SS Sequence:

ATCTTATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCAATCTTATTT

Flanking Amino Acid:

VLPEHVSAVLDALSWKIPEI

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

78.6

35.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.2

0.77

0.8

81.6

34.4

Minor 5ss

39.2

-1.2

2.9

42.5

Minor BPS

0.23

1.6

68.79

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011000

108611251 - 108631912

20662