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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108627998_108628326_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108627998 - 108628326

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCATTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TATTTTGTAAAT

Flanking Amino Acid:

VKVAVLVSGTGTNLAALINY

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

59.3

0.21

1.7

70.2

40.1

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

54.6

0.22

2.1

77.65

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011000

108611251 - 108631912

20662