Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108653733_108654664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108653733 - 108654664

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTTTCTAATT

Flanking Amino Acid:

GMGAYSPAPQISKDMLLKIR

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.3

0.61

0.9

35.1

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

63.3

0.5

1.6

80.73

35.2

Associated Gene:

Gene:

GART

Ensembl Gene ID:

ENSAPLG00000008933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009464

108635753 - 108668276

32524

ENSAPLT00000032784

108634516 - 108671122

36607

ENSAPLT00000032437

108635121 - 108671122

36002

ENSAPLT00000031100

108634516 - 108665279

30764

ENSAPLT00000040230

108616623 - 108664316

47694

ENSAPLT00000022302

108634474 - 108671122

36649

ENSAPLT00000039337

108634516 - 108667017

32502