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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108785886_108787595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108785886 - 108787595

Intron Length:

1710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TAAGTCAGAAAA

Flanking Amino Acid:

PIALPSAPGFGIGGIASMPS

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.1

37.2

Major BPS

0.1

59.7

32.6

Major PPT

74.7

0.56

0.7

70.2

23.8

Minor 5ss

46.6

-0.3

2.8

62.9

42.7

Minor BPS

43.4

-0.5

1.8

52.64

38.4

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345