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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108793447_108796835_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108793447 - 108796835

Intron Length:

3389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTACACACTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTTTCTACACA

Flanking Amino Acid:

EQQQLEKKLPVTFEDKKREN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

55.6

0.13

1.1

53.2

35.2

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

53.6

0.1

2.1

71.26

41.2

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345

ENSAPLT00000028980

108771137 - 108845579

74443

ENSAPLT00000026636

108787971 - 108865481

77511

ENSAPLT00000021618

108771137 - 108845392

74256