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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108797099_108797664_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108797099 - 108797664

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCAAT

5'SS Class:

major

3'SS Sequence:

TTAAATGCTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTAAAT

U12 Branch Point Sequence:

TTTTGGTTAAAT

Flanking Amino Acid:

ERRKEIERREAAKRELERQR

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

77.9

38.6

Major BPS

64.6

0.36

1.3

73.3

39.1

Major PPT

0.18

1.2

56.4

43.2

Minor 5ss

46.6

-0.3

2.7

45.2

Minor BPS

55.6

0.25

2.5

85.06

41.4

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026636

108787971 - 108865481

77511

ENSAPLT00000021618

108771137 - 108845392

74256

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345

ENSAPLT00000028980

108771137 - 108845579

74443