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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108798130_108801825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108798130 - 108801825

Intron Length:

3696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCTACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCTAC

U12 Branch Point Sequence:

TTGTCCTCTACT

Flanking Amino Acid:

EITHLQQQLQESQQMLGRLI

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

45.6

-0.2

1.3

41.7

38.6

Major PPT

71.4

0.48

0.9

69.3

35.9

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

65.2

0.56

1.9

84.68

41.8

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026636

108787971 - 108865481

77511

ENSAPLT00000021618

108771137 - 108845392

74256

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345

ENSAPLT00000028980

108771137 - 108845579

74443