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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108838373_108841042_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108838373 - 108841042

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAGTTAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCACTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTCACT

Flanking Amino Acid:

PGGWWEGELQARGKKRQIGW

Intron Amino Acid Position:

1109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

73.3

31.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.9

0.74

0.8

34.3

Minor 5ss

38.6

-1.3

2.7

45.8

36.2

Minor BPS

72.2

0.78

1.7

90.89

33.1

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021618

108771137 - 108845392

74256

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345

ENSAPLT00000028980

108771137 - 108845579

74443

ENSAPLT00000026636

108787971 - 108865481

77511