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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108857886_108858331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108857886 - 108858331

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTAATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

ACCATTTTACCT

Flanking Amino Acid:

EVPEFKEFVKRLAMDPRCKG

Intron Amino Acid Position:

1350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.1

29.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

76.7

0.6

72.9

41.8

Minor 5ss

31.5

-2.1

3.4

38.4

40.9

Minor BPS

49.1

0.01

1.6

61.62

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026636

108787971 - 108865481

77511

ENSAPLT00000007524

108771137 - 108865481

94345