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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108863857_108864284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108863857 - 108864284

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

GTGTTTACACTT

Flanking Amino Acid:

GIELKPCRSHGKSNPYCEVT

Intron Amino Acid Position:

1606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

72.8

0.57

30.3

Major PPT

0.74

0.7

32.6

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

41.4

-0.5

1.9

56.84

40.5

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026636

108787971 - 108865481

77511

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345