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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108864459_108865332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108864459 - 108865332

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TATTTCTAAGCA

Flanking Amino Acid:

VFERDQFSPDDFLGRTEIRV

Intron Amino Acid Position:

1664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

85.1

0.79

0.8

82.2

34.1

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

57.2

0.22

1.9

72.05

40.1

Associated Gene:

Gene:

ITSN1

Ensembl Gene ID:

ENSAPLG00000007137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017876

108771137 - 108865481

94345

ENSAPLT00000007524

108771137 - 108865481

94345

ENSAPLT00000026636

108787971 - 108865481

77511