Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108897337_108898087_F

Intron Information:

Intron Rank:

142805

Intron Class:

major

Intron Phase:

Intron Coordinates:

108897337 - 108898087

Intron Length:

751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

TCGTTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGGAT

U12 Branch Point Sequence:

TCGTTCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

59.7

40.7

Major BPS

62.6

0.31

1.4

63.1

44.4

Major PPT

77.8

0.63

0.8

72.3

32.5

Minor 5ss

35.8

-1.6

3.4

54.1

43.1

Minor BPS

49.2

-0

62.55

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035560

108897014 - 108898835

1822