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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108968071_108968320_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108968071 - 108968320

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGTTTC

5'SS Class:

weak_major

3'SS Sequence:

TTCTTGAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTTTCTTGAAAA

Flanking Amino Acid:

MADPVAFQVFLVWFLEHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

67.9

38.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

67.4

0.39

1.1

63.2

Minor 5ss

0.34

2.2

70.5

40.1

Minor BPS

63.9

0.43

1.6

73.41

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028293

108967970 - 108983542

15573