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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108968071_108971697_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108968071 - 108971697

Intron Length:

3627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATGTTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTTTTCAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTTCTTTTCAAG

Flanking Amino Acid:

LNGRSCCFPSPETAAVLKRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

67.9

38.2

Major BPS

67.6

0.44

1.2

Major PPT

83.5

0.75

0.9

83.1

32.3

Minor 5ss

0.34

2.2

70.5

40.1

Minor BPS

48.7

-0.2

1.9

61.29

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037253

108967804 - 108973400

5597

ENSAPLT00000036208

108967804 - 108983542

15739

ENSAPLT00000039214

108947162 - 108973400

26239